Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932900.1_cds_XP_016479342.1_70895
CDS Infomation

[gene=LOC107800641] [db_xref=GeneID:107800641] [protein=protease 2-like isoform X3] [protein_id=XP_016479342.1] [location=complement(join(15173..15362,15528..15721,16404..16620,17149..17564,18069..18197,18409..18543,18985..19191,19279..19423,19501..19723,20304..20388))] [gbkey=CDS]
Sequence

ATGAAGAGCGTATCCAATTATGTGATTGGAGTTTCTAAGAAGGAACAAGTACTGCTAGAC
TGGAATGAAATTGCGGAAAGATATGGATATGTTCATGTGGGTACATGTCGAGTGTCTCCA
GACCACAATTATCTTGCTTACACAGTTGATGTTACTGGTAGTGAGCAGTTTGTGCTTCAG
ATTAAAGAACTTCGGAATGACCGTGTTCTGCCAACCCTAGAAGTTGAAGGGGTTGTTAGC
CTGGAATGGGCTCAAGATTCTTGTACTTTCTTCTATACATTATCCGACCAGAACCAACGT
CCTTACAGGGTACATTGCGTAAAACTGGGATCAGATTCTGTGCATGATGTCCCATTGTTT
GTAGAAAATGATTCCAGTTTCTGTGTGGACATAGCAAGTACAAAGGATGGAAAGTTTATT
ACTGTGAATTCTAATTCAAGAACTTCATCTGAGGTTTATGTCATCAATGCAGCCAATCTG
CAGACTGGAATTCAAAGATTTTGTAAGCGTGTGTCTGGTGTACAATATTTTCTTGAACAT
CATCATGGATTTTTCTATGTTCTCACAAATTCTCATAATGTTGGTGAGGAATCACCTTCT
AGTGGAGAGTATTATTTGGCTAGATGCCCTGTTGAGAACTTGCAGTCAACATGTTTGCAG
AATATTATAGTACCCAGTGGAGACATTTTCATCCAAGATATGGACATGTTTAATGAACAT
TTGGTGCTTTTTCTCAACAAAGAGGGTTCCTCATCGATATGTTCTGTTGATATGCGAACG
ATCATCAATTGTGAGGAACAAATGAAGATTGATGAACTTAACCCATGGTTCTTTCCTCTT
CCCTCTGATATGTGTGCAATAACTCCAGGATCAAATCATGATTTCACACGATCTGTATAT
CGCGCTGTTGTTTCTTCCCCAGTGATGCCTGATGTTATTGTTGACTATGATATGTCAAGA
AGAATGTTCTCTGTCATTCATCAAGAAGAAGTAATTGATGTCTCCCACGATACTAAGTGC
CACTCAAACAATGAAGAGAGAAGCAGAAATGAGCTTCTCGGCATCCCTTTAAAGAAGGAA
AGATACATTCAGATTAATGAAGTACAGAGATGGAGTGACTTTGCTGAGATTTATTCCTGT
GAAGAAAAGGAAGTGATATCGCATGATGGTGCAAGGATTCCTATAACTATTCTGTTCTCT
CGTAAAGCACATAAGAAGGATCAGTCTCCTGGGATTCTACATGGATATGGAGCATATGGT
GAAGTTTTAGACAAAAGCTGGTGTGGGGACCGCCTGAGCTTACTTGATCGTGGTTGGCTG
ATTGCATTTGCTGATGTAAGGGGTGGTGGTGGTCCAGATCCTTCGTGGCACAAATCTGGG
AGTGGAATGAGCAAGTTGAACTCTATAAATGATTTCATATCATGCGGAGAATACCTTGTC
AGTGAGGGTTATGTCCACAAACATCAGCTGGGAGCTATTGGTGTAAGTGCTGGAAGTCTT
CTTGTTGCGGCAGCAATTAACATGCACCCTGAACTCTTTCGAGCTGCAATTCTGAAGGTT
CCTTTTCTTGATGTGTGCAGTAGCTTGTTGGATCCCACCTTGCCTCTCACTGTTTTAGAC
TACGAAGAATTCGGCAATCCTCAACTACGGGCCCACTTTGACTATATTTTGAAGTATTCT
CCTTATGACAATATTCCTGAAGGAGTTTGTTGTCCGCCAATGCTTGTGAAAGCTTCATTG
AATGACTCCAGAGTTGGCGTTTGGGAAGCTGCAAAGTGGGTTGCCAAGATACGAGATAAA
ACATGCACTAGGTGTTCCTCTGCGGTCATACTTCAGACAAACATGAGTGGAGGACATTTT
GGTGAAGGTGGTCGTTTTGGCCAATGCGAGGAAGCAGCTTATGAATACGCTTTTCTGATG
AAAGTCCTTGGGAAATCTTGA

Peptide Sequence

PEP ID

XP_016479342.1
PEP Infomation

PREDICTED: protease 2-like isoform X3 [Nicotiana tabacum]
Sequence

MKSVSNYVIGVSKKEQVLLDWNEIAERYGYVHVGTCRVSPDHNYLAYTVDVTGSEQFVLQ
IKELRNDRVLPTLEVEGVVSLEWAQDSCTFFYTLSDQNQRPYRVHCVKLGSDSVHDVPLF
VENDSSFCVDIASTKDGKFITVNSNSRTSSEVYVINAANLQTGIQRFCKRVSGVQYFLEH
HHGFFYVLTNSHNVGEESPSSGEYYLARCPVENLQSTCLQNIIVPSGDIFIQDMDMFNEH
LVLFLNKEGSSSICSVDMRTIINCEEQMKIDELNPWFFPLPSDMCAITPGSNHDFTRSVY
RAVVSSPVMPDVIVDYDMSRRMFSVIHQEEVIDVSHDTKCHSNNEERSRNELLGIPLKKE
RYIQINEVQRWSDFAEIYSCEEKEVISHDGARIPITILFSRKAHKKDQSPGILHGYGAYG
EVLDKSWCGDRLSLLDRGWLIAFADVRGGGGPDPSWHKSGSGMSKLNSINDFISCGEYLV
SEGYVHKHQLGAIGVSAGSLLVAAAINMHPELFRAAILKVPFLDVCSSLLDPTLPLTVLD
YEEFGNPQLRAHFDYILKYSPYDNIPEGVCCPPMLVKASLNDSRVGVWEAAKWVAKIRDK
TCTRCSSAVILQTNMSGGHFGEGGRFGQCEEAAYEYAFLMKVLGKS

Transcript Sequence

Gene sequence data has not been registered.